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Abstract
Elucidating biological processes has relied on the establishment of model organisms, many of which offer advantageous features such as rapid axenic growth, extensive knowledge of their physiological features and gene content, and the ease with which they can be genetically manipulated. The unicellular green alga Chlamydomonas reinhardtii has been an exemplary model that has enabled many scientific breakthroughs over the decades, especially in the fields of photosynthesis, cilia function and biogenesis, and the acclimation of photosynthetic organisms to their environment. Here, we discuss recent molecular/technological advances that have been applied to C. reinhardtii and how they have further fostered its development as a "flagship" algal system. We also explore the future promise of this alga in leveraging advances in the fields of genomics, proteomics, imaging, and synthetic biology for addressing critical future biological issues.
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Peter Gao
July 07, 2023
Awards

Peter Gao awarded Scialog grant for biosignature research

Abstract
Rock fragments of the Cb-type asteroid Ryugu returned to Earth by the JAXA Hayabusa2 mission share mineralogical, chemical, and isotopic properties with the Ivuna-type (CI) carbonaceous chondrites. Similar to CI chondrites, these fragments underwent extensive aqueous alteration and consist predominantly of hydrous minerals likely formed in the presence of liquid water on the Ryugu parent asteroid. Here we present an in situ analytical survey performed by secondary ion mass spectrometry from which we have estimated the D/H ratio of Ryugu's hydrous minerals, D/H-Ryugu, to be [165 +/- 19] x 10(-6), which corresponds to delta D-Ryugu = +59 +/- 121 parts per thousand (2 sigma). The hydrous mineral D/H-Ryugu's values for the two sampling sites on Ryugu are similar; they are also similar to the estimated D/H ratio of hydrous minerals in the CI chondrites Orgueil and Alais. This result reinforces a link between Ryugu and CI chondrites and an inference that Ryugu's samples, which avoided terrestrial contamination, are our best proxy to estimate the composition of water at the origin of hydrous minerals in CI-like material. Based on this data and recent literature studies, the contribution of CI chondrites to the hydrogen of Earth's surficial reservoirs is evaluated to be similar to 3%. We conclude that the water responsible for the alteration of Ryugu's rocks was derived from water ice precursors inherited from the interstellar medium; the ice partially re-equilibrated its hydrogen with the nebular H-2 before being accreted on the Ryugu's parent asteroid.
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Abstract
We have studied the high-pressure vibrational and structural behavior of bulk graphite and graphene nanoplatelets at room temperature by means of high-pressure Raman spectroscopic and x-ray diffraction probes. We have detected a clear pressure-induced structural transition in both materials, evidenced by the appearance of new Bragg peaks and Raman features, deviating from the starting hexagonal graphitic structure. The high-pressure phase is identified as a partially disordered orthorhombic structure, consisting of mixed sp2- and sp3-type bonding. Our experimental findings serve as direct evidence for the existence of a metastable transient modification in cold compressed carbon, lying between the sp2-type graphite and sp3-type diamond allotropes.
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Abstract
The local structure and density of ternary Fe-C-S liquid alloys have been studied using a combination of in situ X-ray diffraction and absorption experiments between 1 and 5 GPa and 1600-1900 K. The addition of up to 12 at% of carbon (C) to Fe-S liquid alloys does not significantly modify the structure, which is largely controlled by the perturbation to the Fe-Fe network induced by S atoms. The liquid density determined from diffraction and/or absorption techniques allows us to build a non-ideal ternary mixing model as a function of pressure, temperature, and composition in terms of the content of alloying light elements. The composition of the Moon's core is addressed based on this thermodynamic model. Under the assumption of a homogeneous liquid core proposed by two recent Moon models, the sulfur content would be 27-36 wt% or 12-23 wt%, respectively, while the carbon content is mainly limited by the Fe-C-S miscibility gap, with an upper bound of 4.3 wt%. On the other hand, if the core is partially molten, the core temperature is necessarily lower than 1850 K estimated in the text, and the composition of both the inner and outer core would be controlled by aspects of the Fe-C-S phase diagram not yet sufficiently constrained.
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Abstract
Transposable elements (TE) are mobile DNA sequences whose excessive proliferation endangers the host. Although animals have evolved robust TE-targeting defenses, including Piwi-interacting (pi)RNAs, retrotransposon LINE-1 (L1) still thrives in humans and mice. To gain insights into L1 endurance, we characterized L1 Bodies (LBs) and ORF1p complexes in germ cells of piRNA-deficient Maelstrom null mice. We report that ORF1p interacts with TE RNAs, genic mRNAs, and stress granule proteins, consistent with earlier studies. We also show that ORF1p associates with the CCR4-NOT deadenylation complex and PRKRA, a Protein Kinase R factor. Despite ORF1p interactions with these negative regulators of RNA expression, the stability and translation of LB-localized mRNAs remain unchanged. To scrutinize these findings, we studied the effects of PRKRA on L1 in cultured cells and showed that it elevates ORF1p levels and L1 retrotransposition. These results suggest that ORF1p-driven condensates promote L1 propagation, without affecting the metabolism of endogenous RNAs.
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Abstract
Volcanic seismicity provides essential insights into the behavior of an active volcano across multiple time scales. However, to understand how magma moves as the eruption cycle develops, better knowledge of the geometry and physical properties of the magma plumbing system is required. In this study, using full-wave ambient noise tomography, we image the three-dimensional (3-D) crustal shear-wave velocity structure below Great Sitkin Volcano in the central Aleutian Arc. The velocity model reveals two low-velocity anomalies correlating with the migration of volcanic seismicity. With a bulk melt fraction of about 2.5%-9%, these low-velocity anomalies are interpreted as mushy magma reservoirs. We propose a six-stage eruption cycle to explain the migration of seismicity and the alternating eruption of the two reservoirs with different recharging histories. These findings have broad implications for the dynamics of magma plumbing systems and the structural control of eruption behaviors.
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Abstract
The goals of NASA's Mars 2020 mission include searching for evidence of ancient life on Mars, studying the geology of Jezero crater, understanding Mars' current and past climate, and preparing for human exploration of Mars. During the mission's first science campaign, the Perseverance rover's SHERLOC deep UV Raman and fluorescence instrument collected microscale, two-dimensional Raman and fluorescence images on 10 natural (unabraded) and abraded targets on two different Jezero crater floor units: Seitah and Maaz. We report SHERLOC Raman measurements collected during the Crater Floor Campaign and discuss their implications regarding the origin and history of Seitah and Maaz. The data support the conclusion that Seitah and Maaz are mineralogically distinct igneous units with complex aqueous alteration histories and suggest that the Jezero crater floor once hosted an environment capable of supporting microbial life and preserving evidence of that life, if it existed.
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Abstract
We describe the discovery of a solar neighborhood (d = 468 pc) binary system with a main-sequence sunlike star and a massive noninteracting black hole candidate. The spectral energy distribution of the visible star is described by a single stellar model. We derive stellar parameters from a high signal-to-noise Magellan/MIKE spectrum, classifying the star as a main-sequence star with T-eff = 5972 K, logg = 4.54, and M = 0.91 M-circle dot. The spectrum shows no indication of a second luminous component. To determine the spectroscopic orbit of the binary, we measured the radial velocities of this system with the Automated Planet Finder, Magellan, and Keck over four months. We show that the velocity data are consistent with the Gaia astrometric orbit and provide independent evidence for a massive dark companion. From a combined fit of our spectroscopic data and the astrometry, we derive a companion mass of 11.39(-1.31)(+1.51) M-circle dot. We conclude that this binary system harbors a massive black hole on an 1.51-eccentric (e = 0.46 +/- 0.02), 185.4 +/- 0.1 day orbit. These conclusions are independent of El-Badry et al., who recently reported the discovery of the same system. A joint fit to all available data yields a comparable period solution but a lower companion mass of 9.32(-0.21)(+0.22) M-circle dot. Radial velocity fits to all available data produce a unimodal solution for the period that is not possible with either data set alone. The combination of both data sets yields the most accurate orbit currently available.
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