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Abstract
A set of genes, including a lectin, two scavenger receptors and two actin regulators, were found to aid the early steps of coral-algal endosymbiosis, including algae recognition and uptake, in a Xenia soft coral species. The findings were made possible by using a combination of RNA interference-mediated gene knockdown, single-cell RNA sequencing (scRNA-seq), bioinformatics and cell biology approaches.
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Abstract
How, when, and why organisms age are fascinating issues that can only be fully addressed by adopting an evolutionary perspective. Consistently, the main evolutionary theories of ageing, namely the Mutation Accumulation theory, the Antagonistic Pleiotropy theory, and the Disposable Soma theory, have formulated stimulating hypotheses that structure current debates on both the proximal and ultimate causes of organismal ageing. However, all these theories leave a common area of biology relatively under-explored. The Mutation Accumulation theory and the Antagonistic Pleiotropy theory were developed under the traditional framework of population genetics, and therefore are logically centred on the ageing of individuals within a population. The Disposable Soma theory, based on principles of optimising physiology, mainly explains ageing within a species. Consequently, current leading evolutionary theories of ageing do not explicitly model the countless interspecific and ecological interactions, such as symbioses and host-microbiomes associations, increasingly recognized to shape organismal evolution across the Web of Life. Moreover, the development of network modelling supporting a deeper understanding on the molecular interactions associated with ageing within and between organisms is also bringing forward new questions regarding how and why molecular pathways associated with ageing evolved. Here, we take an evolutionary perspective to examine the effects of organismal interactions on ageing across different levels of biological organisation, and consider the impact of surrounding and nested systems on organismal ageing. We also apply this perspective to suggest open issues with potential to expand the standard evolutionary theories of ageing.
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Abstract
The timing of delivery and the types of body that contributed volatiles to the terrestrial planets remain highly debated(1,2). For example, it is unknown if differentiated bodies, such as that responsible for the Moon-forming giant impact, could have delivered substantial volatiles(3,4) or if smaller, undifferentiated objects were more probable vehicles of water delivery(5-7). Here we show that the water contents of minerals in achondrite meteorites (mantles or crusts of differentiated planetesimals) from both the inner and outer portions of the early Solar System are <= 2 mu g g(-1) H2O. These are among the lowest values ever reported for extraterrestrial minerals. Our results demonstrate that differentiated planetesimals efficiently degassed before or during melting. This finding implies that substantial amounts of water could only have been delivered to Earth by means of unmelted material.
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Abstract
An experimental platform for dynamic diamond anvil cell (dDAC) research has been developed at the High Energy Density (HED) Instrument at the European X-ray Free Electron Laser (European XFEL). Advantage was taken of the high repetition rate of the European XFEL (up to 4.5 MHz) to collect pulse-resolved MHz X-ray diffraction data from samples as they are dynamically compressed at intermediate strain rates (≤103 s-1), where up to 352 diffraction images can be collected from a single pulse train. The set-up employs piezo-driven dDACs capable of compressing samples in ≥340 s, compatible with the maximum length of the pulse train (550 s). Results from rapid compression experiments on a wide range of sample systems with different X-ray scattering powers are presented. A maximum compression rate of 87 TPa s-1 was observed during the fast compression of Au, while a strain rate of 1100 s-1 was achieved during the rapid compression of N2 at 23 TPa s-1.
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Abstract
Previous examinations of astrophysical chemical reaction networks found that Earth's atmospheric network was distinct in its hierarchical organization and scale-free nature. If Earth's unique atmospheric network structure is due to the coevolution between the biosphere and atmosphere, it may hint at a novel planetary-scale biosignature. Here, we use updated chemical reaction networks of planetary atmospheres and explore their topologies using a plethora of diagnostic techniques from network science and graph theory, including global metrics, centrality metrics, community detection, and cluster analysis methods. We show that the topologies of atmospheric chemical reaction networks of different planetary bodies in the Solar System are distinct from one another. While we find that model networks of Earth's atmosphere do not display scale-free topology, Earth's chemical reaction network is nonetheless distinguishable from those of other Solar System atmospheres through various other metrics. Earth's network has the most nonrandom topology of all the planetary networks and, in some global metrics, is more similar to biological networks than are the other planetary networks. Finally, we discuss how further investigations of atmospheric chemical networks using more advanced network representations and novel network metrics may lead to the development of a network-based biosignature applicable to exoplanets.
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Abstract
Samples of the carbonaceous asteroid (162173) Ryugu were collected and brought to Earth by the Hayabusa2 spacecraft. We investigated the macromolecular organic matter in Ryugu samples and found that it contains aromatic and aliphatic carbon, ketone, and carboxyl functional groups. The spectroscopic features of the organic matter are consistent with those in chemically primitive carbonaceous chondrite meteorites that experienced parent-body aqueous alteration (reactions with liquid water). The morphology of the organic carbon includes nanoglobules and diffuse carbon associated with phyllosilicate and carbonate minerals. Deuterium and/or nitrogen-15 enrichments indicate that the organic matter formed in a cold molecular cloud or the presolar nebula. The diversity of the organic matter indicates variable levels of aqueous alteration on Ryugu's parent body.
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Abstract
Transposable elements (TE) are mobile DNA sequences whose excessive proliferation endangers the host. Although animals have evolved robust TE-targeting defenses, including Piwi-interacting (pi)RNAs, retrotransposon LINE-1 (L1) still thrives in humans and mice. To gain insights into L1 endurance, we characterized L1 Bodies (LBs) and ORF1p complexes in germ cells of piRNA-deficient Maelstrom null mice. We report that ORF1p interacts with TE RNAs, genic mRNAs, and stress granule proteins, consistent with earlier studies. We also show that ORF1p associates with the CCR4-NOT deadenylation complex and PRKRA, a Protein Kinase R factor. Despite ORF1p interactions with these negative regulators of RNA expression, the stability and translation of LB-localized mRNAs remain unchanged. To scrutinize these findings, we studied the effects of PRKRA on L1 in cultured cells and showed that it elevates ORF1p levels and L1 retrotransposition. These results suggest that ORF1p-driven condensates promote L1 propagation, without affecting the metabolism of endogenous RNAs.
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Abstract
Both volcano-tectonic (VTs) and deep long-period earthquakes (DLPs) have been documented at Akutan Volcano, Alaska and may reflect different active processes helpful for eruption forecasting. In this study, we perform high-resolution earthquake detection, classification, and relocation using seismic data from 2005 to 2017 to investigate their relationship with underlying magmatic processes. We find that the 2,787 VTs and 787 DLPs are concentrated above and below the inferred magma reservoir respectively. They both are clustered as swarms and occur preferentially during inflation episodes with no spatial migrations. However, moment release rates of DLP swarms show a stronger correlation with inflation and their low-frequency content is likely a source instead of a path effect. Therefore, we infer that DLPs are directly related to unsteady magma movement through a complex pathway. In comparison, repeating events are observed in VTs. Thus, we conclude that they represent fault rupture triggered by magma/fluid movement or larger earthquakes.
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Abstract
The Mars 2020/Mars Sample Return (MSR) Sample Depot Science Community Workshop was held on September 28 and 30, 2022, to assess the Scientifically-Return Worthy (SRW) value of the full collection of samples acquired by the rover Perseverance at Jezero Crater, and of a proposed subset of samples to be left as a First Depot at a location within Jezero Crater called Three Forks. The primary outcome of the workshop was that the community is in consensus on the following statement: The proposed set of ten sample tubes that includes seven rock samples, one regolith sample, one atmospheric sample, and one witness tube constitutes a SRW collection that: (1) represents the diversity of the explored region around the landing site, (2) covers partially or fully, in a balanced way, all of the International MSR Objectives and Samples Team scientific objectives that are applicable to Jezero Crater, and (3) the analyses of samples in this First Depot on Earth would be of fundamental importance, providing a substantial improvement in our understanding of Mars. At the conclusion of the meeting, there was overall community support for forming the First Depot as described at the workshop and placing it at the Three Forks site. The community also recognized that the diversity of the Rover Cache (the sample collection that remains on the rover after placing the First Depot) will significantly improve with the samples that are planned to be obtained in the future by the Perseverance rover and that the Rover Cache is the primary target for MSR to return to Earth.
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