PIWI-interacting RNAs (piRNAs) silence transposons in germ cells to maintain genome stability and animal fertility. Rhino, a rapidly evolving heterochromatin protein 1 (HP1) family protein, binds Deadlock in a species-specific manner and so defines the piRNA-producing loci in the Drosophila genome. Here, we determine the crystal structures of Rhino-Deadlock complex in Drosophila melanogaster and simulans. In both species, one Rhino binds the N-terminal helix-hairpin-helix motif of one Deadlock protein through a novel interface formed by the beta-sheet in the Rhino chromoshadow domain. Disrupting the interface leads to infertility and transposon hyperactivation in flies. Our structural and functional experiments indicate that electrostatic repulsion at the interaction interface causes cross-species incompatibility between the sibling species. By determining the molecular architecture of this piRNA-producing machinery, we discover a novel HP1-partner interacting mode that is crucial to piRNA biogenesis and transposon silencing. We thus explain the cross-species incompatibility of two sibling species at the molecular level.

The heavy occupancy of transposons in the genome implies that existing organisms have survived from multiple, independent rounds of transposon invasions. However, how and which host cell types survive the initial wave of transposon invasion remain unclear. We show that the germline stem cells can initiate a robust adaptive response that rapidly endogenizes invading P element transposons by activating the DNA damage checkpoint and piRNA production. We find that temperature modulates the P element activity in germline stem cells, establishing a powerful tool to trigger transposon hyper-activation. Facing vigorous invasion, Drosophila first shut down oogenesis and induce selective apoptosis. Interestingly, a robust adaptive response occurs in ovarian stem cells through activation of the DNA damage checkpoint. Within 4 days, the hosts amplify P element-silencing piRNAs, repair DNA damage, subdue the transposon, and reinitiate oogenesis. We propose that this robust adaptive response can bestow upon organisms the ability to survive recurrent transposon invasions throughout evolution.

We use density functional theory to calculate the equilibrium isotopic fractionation factors of zirconium (Zr) in a variety of minerals including zircon, baddeleyite, Ca-catapleiite, ilmenite, geikielite, magnetite, apatite, K-feldspar, quartz, olivine, clinopyroxene, orthopyroxene, amphibole, and garnet. We also report equilibrium isotopic fractionation factors for Hf in zircons, Ca-catapleiite, and ilmenite. These calculations show that coordination environment is an important control on Zr and Hf isotopic fractionation, with minerals with Zr and Hf in low coordinations predicted to be enriched in the heavy isotopes of Zr and Hf, relative to those with Zr and Hf in high coordinations. At equilibrium, zircon, which hosts Zr and Hf in 8-fold coordination, is predicted to have low Zr-94/Zr-90 and Hf-179/Hf-177 ratios compared to silicate melt, which hosts Zr and Hf in 6-fold coordination. However, our modeling results indicate that little equilibrium isotopic fractionation for Zr is expected during magmatic differentiation and zircon crystallization. We show through isotopic transport modeling that the Zr isotopic variations that were documented in igneous rocks are likely due to diffusion-driven kinetic isotopic fractionation. The two settings where this could take place are (i) diffusion-limited crystallization of zircon (DLC model) and (ii) diffusion-triggered crystallization of zircon (DTC model) in the boundary layer created by the growth of Zr-poor minerals. Fractional crystallization of zircons enriched in light Zr isotopes by diffusion can drive residual magmas toward heavy Zr isotopic compositions. Our diffusive transport model gives the framework to interpret Zr isotope data and gain new insights into the cooling history of igneous rocks and the setting of zircon crystallization.

Serving as a host factor for human immunodeficiency virus (HIV) integration, LEDGF/p75 has been under extensive study as a potential target for therapy. However, as a highly conserved protein, its physiological function remains to be thoroughly elucidated. Here, we characterize the molecular function of dP75, the Drosophila homolog of LEDGF/p75, during oogenesis. dP75 binds to transcriptionally active chromatin with its PWWP domain. The C-terminus integrase-binding domain-containing region of dP75 physically interacts with the histone kinase Jil-1 and stabilizes it in vivo. Together with Jil-1, dP75 prevents the spreading of the heterochromatin mark-H3K9me2-onto genes required for oogenesis and piRNA production. Without dP75, ectopical silencing of these genes disrupts oogenesis, activates transposons, and causes animal sterility. We propose that dP75, the homolog of an HIV host factor in Drosophila, partners with and stabilizes Jil-1 to ensure gene expression during oogenesis by preventing ectopic heterochromatin spreading. Copyright (C) 2020, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, and Genetics Society of China. Published by Elsevier Limited and Science Press. All rights reserved.

Plate subduction greatly influences the physical and chemical characteristics of Earth's surface and deep interior, yet the timing of its initiation is debated because of the paucity of exposed rocks from Earth's early history. We show that the titanium isotopic composition of orthogneisses from the Acasta Gneiss Complex spanning the Hadean to Eoarchean transition falls on two distinct magmatic differentiation trends. Hadean tonalitic gneisses show titanium isotopic compositions comparable to modern evolved tholeiitic magmas, formed by differentiation of dry parental magmas in plume settings. Younger Eoarchean granitoid gneisses have titanium isotopic compositions comparable to modern calc-alkaline magmas produced in convergent arcs. Our data therefore document a shift from tholeiitic- to calc-alkaline-style magmatism between 4.02 and 3.75 billion years (Ga) in the Slave craton.

Moderately volatile elements (MVEs) are variably depleted in planetary bodies, reflecting the imprints of nebular and planetary processes. Among MVEs, Na, K, and Rb are excellent tracers for unraveling the history of MVE depletion in planetary bodies because they have similar geochemical behaviors but can be chemically fractionated by evaporation and condensation processes. Furthermore, K and Rb are amenable to high-precision isotopic analyses, which can help constrain the conditions of evaporation and condensation. To quantitatively understand why Na, K, and Rb are depleted in planetary bodies, we have carried out vacuum evaporation experiments from basaltic melt at 1200 and 1400 degrees C to study their evaporation kinetics and isotopic fractionations. We chose this composition because it is relevant to evaporation from small differentiated planetesimals. The Rb isotopic compositions of the evaporation residues were measured by multicollector inductively coupled plasma mass spectrometry (MC-ICPMS), and the K isotopic compositions were measured along profiles across the residues by secondary ion mass spectrometry (SIMS). In the 1400 degrees C run products, we found that the concentrations of both K and Rb in the run products decreased from core to rim, which was accompanied by a heavy K isotope enrichment near the surface. This indicates that, in this run, evaporation was limited by diffusion. To use those data quantitatively, we derive analytical equations that describe the evaporation rate and isotopic fractionation associated with diffusion-limited evaporation from a sphere, slab, and cylinder in transient and quasi-steady state regimes. This model is used to tease out the roles that diffusive transport in the melt and evaporation at the melt/gas interface play in setting the elemental depletion and isotopic composition of the residue. Under our experimental conditions, volatility decreases in the order of Na, Rb, and K. Using our experimental results in a thermodynamic model, we have estimated the product gamma Gamma of activity coefficients x evaporation coefficients of Na, Rb, and K. The measured isotopic compositions of the residues are well explained using Rayleigh distillations, whereby the relative volatilities of K and Rb isotopes are given by the square root of their masses. We use our results and previously published data to predict how K and Rb could have been lost as a function of temperature, melt composition, oxygen fugacity, and saturation degree relevant to Vesta's building blocks. We find that the K and Rb depletions, K/Rb elemental fractionation, and delta K-41 and delta Rb-87 isotopic fractionations of Vesta (as sampled by howardite-eucrite-diogenite (HED) meteorites) are best explained by evaporation of submillimeter size objects for 0.1-10 years at moderate temperatures (similar to 1050 degrees C) in a medium similar to 98.8% saturated.

The isotopic compositions of alkali metal elements are powerful tracers of various geological processes. Coupled K and Rb isotopic studies can potentially yield new clues on the mechanisms responsible for the depletions in moderately volatile elements in planetary objects, global surface geochemical cycles, and mechanistic aspects of water-rock interactions. Rubidium isotopic studies have however been hampered by difficulties in purifying Rb from rocks, notably due to its similar chemical behavior to K. Here we characterize the properties of three different types of resins (AMP-PAN resin; AG50W-X8 and AG50W-X12 cation-exchange resins; Sr resin) for Rb and K purification. We show that AMP-PAN resin and Sr resin can readily separate Rb from K and other matrix elements. However, AMP-PAN resin has a high Rb blank (similar to 80 ng) and is cumbersome to use, which limits its applicability. For cation resins, we test the effects of column length, acid molarity, temperature, pressure drop (flow rate), and resin cross-linkage on the Rb separation using a Fluoropolymer Pneumatic Liquid Chromatography (FPLC) unit built in our laboratory. Increasing column length or resin cross-linkage has a positive effect on the separation, while increasing acid molarity, temperature, or pressure drop (flow rate) has negative impacts. Gravity-driven cation-exchange resin columns fail to cleanly separate Rb from K, but an AG50W-X12 resin column of 150 cm length and 0.16 cm inner diameter installed on a FPLC unit can cleanly separate Rb from K. We separated Rb from synthetic and natural rock samples using three different purification schemes designed based on the three types of resins, and measured the Rb isotopic compositions of the Rb separates by MC-ICPMS. The three methods yielded consistent results, demonstrating the efficacy of our Rb separation and the accuracy of our Rb isotopic analyses. The Rb isotopic compositions of several geostandards were analyzed (BCR-2, BHVO-2, BE-N, AGV-2, GS-N, G-3, and G-A), which can be used in future studies for ground-truthing methodologies used for studying natural samples. Among the three methods, the Sr resin method is the most straightforward for purifying Rb and K simultaneously, and measuring their isotopic compositions in natural samples.

Rare Earth Elements (REEs) are commonly utilized in Earth and environmental sciences to study a variety of geological processes due to their distinct patterns and radioactive-radiogenic decay systems (147Sm-143Nd, 146Sm-142Nd, 138La-138Ce). Advances in analytical techniques now enable the use of REE stable isotopic fractionations to clarify lingering ambiguities in REE systematics. In this study, we employed Nuclear Resonant Inelastic X-ray Scattering (NRIXS) to study the phonon density of states of 151Eu and 161Dy in several pure compounds, as well as in synthetic basalt and andesite glasses, and rhyolite glasses produced under various redox conditions, to determine equilibrium isotopic fractionation factors for the REEs. We additionally utilized Density Functional Theory with a Hubbard U correction (DFT+U) to calculate these factors. Our findings indicate that the directionally averaged mean force constant of Dy3+ is -270 N/m across various compounds, while those of Eu2+ and Eu3+ are -83 and 214 N/m, respectively, in geologically relevant glasses and other pure compounds. These force constants were then used to estimate those of all REEs using scaling arguments. The results suggest that equilibrium isotopic fractionation should be limited for REEs in igneous rocks, allowing for the interpretation of REE isotopic fractionation in these rocks and minerals as a result of kinetic effects. This could facilitate understanding the role of diffusion in igneous rocks and ore formation. Additionally, our results imply that significant Eu isotopic fractionation could exist in hydrothermal fluids, which could aid in understanding the formation of ore deposits and REE cycling in the oceans.