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Abstract
Cells respond to physicalstimuli, such as stiffness1, fluid shear stress2 and hydraulic pressure3,4. Extracellular fluid viscosity is a key physical cue that varies under physiological and pathological conditions, such as cancer5. However, its influence on cancer biology and the mechanism by which cells sense and respond to changes in viscosity are unknown. Here we demonstrate that elevated viscosity counterintuitively increases the motility of various cell types on two-dimensional surfaces and in confinement, and increases cell dissemination from three-dimensional tumour spheroids. Increased mechanical loading imposed by elevated viscosity induces an actin-related protein 2/3 (ARP2/3)-complex-dependent dense actin network, which enhances Na+/H+ exchanger 1 (NHE1) polarization through its actin-binding partner ezrin. NHE1 promotes cell swelling and increased membrane tension, which, in turn, activates transient receptor potential cation vanilloid 4 (TRPV4) and mediates calcium influx, leading to increased RHOA-dependent cell contractility. The coordinated action of actin remodelling/dynamics, NHE1-mediated swelling and RHOA-based contractility facilitates enhanced motility at elevated viscosities. Breast cancer cells pre-exposed to elevated viscosity acquire TRPV4-dependent mechanical memory through transcriptional control of the Hippo pathway, leading to increased migration in zebrafish, extravasation in chick embryos and lung colonization in mice. Cumulatively, extracellular viscosity is a physical cue that regulates both short- and long-term cellular processes with pathophysiological relevance to cancer biology.
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Abstract
The Local Volume Mapper (LVM) project among the fifth iteration of the Sloan Digital Sky Survey (SDSS-V) plans to produce large integral-field spectroscopic survey data. The data will reveal the physical conditions of the interstellar medium in the Milky Way, the Magellanic Clouds, and other local-volume galaxies. We developed the Local Volume Mapper Spectrograph Control Package (LVMSCP) which controls the spectrograph subsystem. The architecture design of the software based on Python 3.9 follows a hierarchical structure composed of high-level, mid-level, low-level software packages, and hardware components. We used the new SDSS message passing protocol CLU for the interaction, based on RabbitMQ that implemented the Advanced Message Queuing Protocol (AMQP). The Actors that receive or produce messages to each other are also the units of the conceptual operation. Furthermore, the package applies asynchronous programming with non-blocking procedures since the three spectrographs should operate simultaneously. For requirement of the incremental code change and management in the collaboration of the developers, we adopted the SDSS Github Action which supports Continuous Integration (CI) / Continuous Deployment (CD). As a part of this, Unit testing with Pytest tests the individual components of a software respectively. Finally, the LVMSCP provides the Application Programming Interface (API) to the Robotic Observation Package (ROP) for the integrated observation to fulfill the required scientific survey execution for the spectrographs.
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Abstract
Sloan Digital Sky Survey fifth-generation (SDSS-V) Local Volume Mapper (LVM) is a wide-field IFU survey that uses an array of four 160 mm telescopes. It provides IFU spectra over the optical range with R similar to 4,000 to reveal the inner components of galaxies and the evolution of the universe. Each telescope observes the science field or the calibration field independently, but all of them should be simultaneously synchronized with the science exposure. To minimize the moving parts, the LVM adopted the siderostat design with a field derotator. We designed the optimized control software for our LVM observation, lvmagp, which controls four focusers, three K-mirror derotators, one fiber selector, four mounts (siderostats), and seven guide cameras. It was built on its owen user interface and messaging protocol called actor and clu based on asynchronous programming. The lvmagp provides three key sequences: autofocus sequence, field acquisition sequence, and autoguide sequence. Also, we designed and fabricated the proto-model siderostat for the software test. The real sky test was made with proto-model siderostat, and the lvmagp showed arcsecond-level field acquisition and autoguide accuracy.
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Abstract
The Sloan Digital Sky Survey V (SDSS-V) is an all-sky, multi-epoch spectroscopic survey designed to decode the stellar evolution of the Milky Way, reveal the inner workings of stars, study the interstellar medium in the Local Volume of galaxies, and track the growth of supermassive black holes across the Universe. SDSS-V presents significant innovations in hardware and instrumentation, with the introduction of a new Focal Plane System instrument that enables multi-object spectroscopy using an array of 500 robotic fibre positioners, and the development of a new robotic observatory for the Local Volume Mapper program. These advances in instrumentation and operations necessitate a similarly evolved computing and software architecture to ensure survey efficiency and to take advantage of the improvements in software engineering and development. In this paper we present the cyberinfrastructure of the SDSS project with focus on the changes introduced since the previous iteration of the project, the adoption of new technologies, and the lessons learned in this process.
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Abstract
The thermal conductivities of mantle and core materials have a major impact on planetary evolution, but their experimental determination requires precise knowledge of sample thickness at high pressure. Despite its importance, thickness in most diamond anvil cell (DAC) experiments is not measured but inferred from equations of state, assuming isotropic contraction upon compression or assuming isotropic expansion upon decompression. Here we provide evidence that in DAC experiments both assumptions are invalid for a range of mechanically diverse materials (KCl, NaCl, Ar, MgO, silica glass, Al2O3). Upon compression, these samples are similar to 30-50% thinner than expected from isotropic contraction. Most surprisingly, all the studied samples continue to thin upon decompression to 10-20 GPa. Our results partially explain some discrepancies among the highly controversial thermal conductivity values of iron at Earth's core conditions. More generally, we suggest that in situ characterization of sample geometry is essential for conductivity measurements at high pressure.
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Abstract
We describe the Sloan Digital Sky Survey IV (SDSS-IV), a project encompassing three major spectroscopic programs. The Apache Point Observatory Galactic Evolution Experiment 2 (APOGEE-2) is observing hundreds of thousands of Milky Way stars at high resolution and. high signal-to-noise ratios in the near-infrared. The Mapping Nearby Galaxies at Apache Point Observatory (MaNGA) survey is obtaining spatially resolved spectroscopy for thousands of nearby galaxies (median z similar to 0.03). The extended Baryon Oscillation Spectroscopic Survey (eBOSS) is mapping the galaxy, quasar, and neutral gas distributions between z similar to 0.6 and 3.5 to constrain cosmology using baryon acoustic oscillations, redshift space distortions, and the shape of the power spectrum. Within eBOSS, we are conducting two major subprograms: the SPectroscopic IDentification of eROSITA Sources (SPIDERS), investigating X-ray AGNs. and galaxies in X-ray clusters, and the Time Domain Spectroscopic Survey (TDSS), obtaining spectra of variable sources. All programs use the 2.5 m Sloan Foundation Telescope at the. Apache Point Observatory; observations there began in Summer 2014. APOGEE-2 also operates a second near-infrared spectrograph at the 2.5 m du Pont Telescope at Las Campanas Observatory, with observations beginning in early 2017. Observations at both facilities are scheduled to continue through 2020. In keeping with previous SDSS policy, SDSS-IV provides regularly scheduled public data releases; the first one, Data Release 13, was made available in 2016 July.
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Abstract
Building on the legacy of the Sloan Digital Sky Survey (SDSS-I and II), SDSS-III is a program of four spectroscopic surveys on three scientific themes: dark energy and cosmological parameters, the history and structure of the Milky Way, and the population of giant planets around other stars. In keeping with SDSS tradition, SDSS-III will provide regular public releases of all its data, beginning with SDSS Data Release 8 (DR8), which was made public in 2011 January and includes SDSS-I and SDSS-II images and spectra reprocessed with the latest pipelines and calibrations produced for the SDSS-III investigations. This paper presents an overview of the four surveys that comprise SDSS-III. The Baryon Oscillation Spectroscopic Survey will measure redshifts of 1.5 million massive galaxies and Ly alpha forest spectra of 150,000 quasars, using the baryon acoustic oscillation feature of large-scale structure to obtain percent-level determinations of the distance scale and Hubble expansion rate at z < 0.7 and at z approximate to 2.5. SEGUE-2, an already completed SDSS-III survey that is the continuation of the SDSS-II Sloan Extension for Galactic Understanding and Exploration (SEGUE), measured medium-resolution (R = lambda/lambda Delta approximate to 1800) optical spectra of 118,000 stars in a variety of target categories, probing chemical evolution, stellar kinematics and substructure, and the mass profile of the dark matter halo from the solar neighborhood to distances of 100 kpc. APOGEE, the Apache Point Observatory Galactic Evolution Experiment, will obtain high-resolution (R approximate to 30,000), high signal-to-noise ratio (S/N >= 100 per resolution element), H-band (1.51 mu m < lambda < 1.70 mu m) spectra of 105 evolved, late-type stars, measuring separate abundances for similar to 15 elements per star and creating the first high-precision spectroscopic survey of all Galactic stellar populations (bulge, bar, disks, halo) with a uniform set of stellar tracers and spectral diagnostics. The Multi-object APO Radial Velocity Exoplanet Large-area Survey (MARVELS) will monitor radial velocities of more than 8000 FGK stars with the sensitivity and cadence (10-40 ms(-1), similar to 24 visits per star) needed to detect giant planets with periods up to two years, providing an unprecedented data set for understanding the formation and dynamical evolution of giant planet systems. As of 2011 January, SDSS-III has obtained spectra of more than 240,000 galaxies, 29,000 z >= 2.2 quasars, and 140,000 stars, including 74,000 velocity measurements of 2580 stars for MARVELS.
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Abstract
The third generation of the Sloan Digital Sky Survey (SDSS-III) took data from 2008 to 2014 using the original SDSS wide-field imager, the original and an upgraded multi-object fiber-fed optical spectrograph, a new near-infrared high-resolution spectrograph, and a novel optical interferometer. All of the data from SDSS-III are now made public. In particular, this paper describes Data Release 11 (DR11) including all data acquired through 2013 July, and Data Release 12 (DR12) adding data acquired through 2014 July (including all data included in previous data releases), marking the end of SDSS-III observing. Relative to our previous public release (DR10), DR12 adds one million new spectra of galaxies and quasars from the Baryon Oscillation Spectroscopic Survey (BOSS) over an additional 3000 deg(2) of sky, more than triples the number of H-band spectra of stars as part of the Apache Point Observatory (APO) Galactic Evolution Experiment (APOGEE), and includes repeated accurate radial velocity measurements of 5500 stars from the Multi-object APO Radial Velocity Exoplanet Large-area Survey (MARVELS). The APOGEE outputs now include the measured abundances of 15 different elements for each star. In total, SDSS-III added 5200 deg(2) of ugriz imaging; 155,520 spectra of 138,099 stars as part of the Sloan Exploration of Galactic Understanding and Evolution 2 (SEGUE-2) survey; 2,497,484 BOSS spectra of 1,372,737 galaxies, 294,512 quasars, and 247,216 stars over 9376 deg(2); 618,080 APOGEE spectra of 156,593 stars; and 197,040 MARVELS spectra of 5513 stars. Since its first light in 1998, SDSS has imaged over 1/3 of the Celestial sphere in five bands and obtained over five million astronomical spectra.
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Abstract
The fourth generation of the Sloan Digital Sky Survey (SDSS-IV) began observations in 2014 July. It pursues three core programs: the Apache Point Observatory Galactic Evolution Experiment 2 (APOGEE-2), Mapping Nearby Galaxies at APO (MaNGA), and the Extended Baryon Oscillation Spectroscopic Survey (eBOSS). As well as its core program, eBOSS contains two major subprograms: the Time Domain Spectroscopic Survey (TDSS) and the SPectroscopic IDentification of ERosita Sources (SPIDERS). This paper describes the first data release from SDSS-IV, Data Release 13 (DR13). DR13 makes publicly available the first 1390 spatially resolved integral field unit observations of nearby galaxies from MaNGA. It includes new observations from eBOSS, completing the Sloan Extended QUasar, Emission-line galaxy, Luminous red galaxy Survey (SEQUELS), which also targeted variability-selected objects and X-ray-selected objects. DR13 includes new reductions of the SDSS-III BOSS data, improving the spectrophotometric calibration and redshift classification, and new reductions of the SDSS-III APOGEE-1 data, improving stellar parameters for dwarf stars and cooler stars. DR13 provides more robust and precise photometric calibrations. Value-added target catalogs relevant for eBOSS, TDSS, and SPIDERS and an updated red-clump catalog for APOGEE are also available. This paper describes the location and format of the data and provides references to important technical papers. The SDSS web site, http://www.sdss.org, provides links to the data, tutorials, examples of data access, and extensive documentation of the reduction and analysis procedures. DR13 is the first of a scheduled set that will contain new data and analyses from the planned similar to 6 yr operations of SDSS-IV.
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Abstract
We use photometric and spectroscopic observations of four detached eclipsing binaries in the globular cluster NGC 3201 to derive masses, radii, and luminosities of the component stars. Spanning across almost three magnitudes in the colour-magnitude diagram, the components offer a unique possibility to test the theory of stellar evolution. Their masses, radii, and luminosities range from 0.66 to 0.84 M-circle dot, 0.68 to 2.46 R-circle dot, and 0.38 to 5.56 L-circle dot, respectively. The distance to the cluster measured from the distance moduli of the component stars amounts to 4.54(-0.14)(+0.11) kpc and agrees with the recent estimate based on Gaia parallaxes. By comparing the M - R and M - L diagrams of the component stars and the colour-magnitude diagram of NGC 3201 to Dartmouth model isochrones, we estimate the most probable age of the cluster to be 11.5 +/- 0.5 Gyr. This estimate is based on three binaries only, as the fourth one seems to evolve along a different path, probably due to non-standard chemical composition and/or history. We confirm the tendency, observed in earlier CASE papers, for the age indicated by the M - R diagram to be younger than that implied by the colour-magnitude diagram.
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