Abstract
replicate 1 Total reads were mapped to the Arabidopsis thaliana genome (TAIR10, www.arabidopsis.org) using TopHat v1.4.0, with parameters --min-segment-intron 40 --max-segment-intron 2000 --bowtie --no-novel-juncs --read-mismatches 2 -GRead counts for each gene were quantified using HTSeq-count with union mode.Genome_build: TAIR10, www.arabidopsis.orgSupplementary_files_format_and_content: tab-delimited text files include read count values for each Sample