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Abstract
An entry from the Cambridge Structural Database, the world's repository for small molecule crystal structures. The entry contains experimental data from a crystal diffraction study. The deposited dataset for this entry is freely available from the CCDC and typically includes 3D coordinates, cell parameters, space group, experimental conditions and quality measures.
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Abstract
Enantiomerically pure (S)-1-phenylethan-1-amine has been applied in Mannich-type condensation between formaldehyde and naphthalenediols leading to the synthesis of chiral bis-dihydro[1,3]naphthoxazines in excellent yields. Salen-type structures have been synthesized, applying R,R- or S,S-cyclohexane-1,2-diamines in condensation with formaldehyde and naphthalene-2-ol. The obtained chiral imidazolidine derivatives of the type 1,1 '-(((3a,7a)-hexahydro-1H-benzo[d]imidazole-1,3(2H)diyl)bis(methylene))bis(naphthalen-2-ol) were evaluated as pre-catalysts for the addition of diethyl zinc to aldehydes. The structures of the newly synthesized compounds were elucidated using D-1 and D-2 NMR experiments (COSY, HMBC, HSQS), elemental analysis, mass spectrometry (HRMS spectra) and single-crystal X-ray diffraction (SCXRD). The products were further characterized with powder X-ray diffraction (PXRD) and thermal analysis (DSC).
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Abstract
Gamete production in most animal species is initiated within an evolutionarily ancient multicellular germline structure, the germline cyst, whose interconnected premeiotic cells synchronously develop from a single progenitor arising just downstream from a stem cell. Cysts in mice, Drosophila, and many other animals protect developing sperm, while in females, cysts generate nurse cells that guard sister oocytes from transposons (TEs) and help them grow and build a Balbiani body. However, the origin and extreme evolutionary conservation of germline cysts remains a mystery. We suggest that cysts arose in ancestral animals like Hydra and Planaria whose multipotent somatic and germline stem cells (neoblasts) express genes conserved in all animal germ cells and frequently begin differentiation in cysts. A syncytial state is proposed to help multipotent stem cell chromatin transition to an epigenetic state with heterochromatic domains suitable for TE repression and specialized function. Most modern animals now lack neoblasts but have retained stem cells and cysts in their early germlines, which continue to function using this ancient epigenetic strategy.
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Abstract
Ethylene plays its essential roles in plant development, growth, and defense responses by controlling the transcriptional reprograming, in which EIN2-C-directed regulation of histone acetylation is the first key-step for chromatin to perceive ethylene signaling. But how the nuclear acetyl coenzyme A (acetyl CoA) is produced to ensure the ethylene-mediated histone acetylation is unknown. Here we report that ethylene triggers the accumulation of the pyruvate dehydrogenase complex (PDC) in the nucleus to synthesize nuclear acetyl CoA to regulate ethylene response. PDC is identified as an EIN2-C nuclear partner, and ethylene triggers its nuclear accumulation. Mutations in PDC lead to an ethylene-hyposensitivity that results from the reduction of histone acetylation and transcription activation. Enzymatically active nuclear PDC synthesize nuclear acetyl CoA for EIN2-C-directed histone acetylation and transcription regulation. These findings uncover a mechanism by which PDC-EIN2 converges the mitochondrial enzyme mediated nuclear acetyl CoA synthesis with epigenetic and transcriptional regulation for plant hormone response.
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Abstract
Algal blooms appear to be increasing on benthic substrates of naturally nutrient-poor lakes worldwide, yet common drivers across these systems remain elusive. The phenomenon has been notable in high-elevation mountain lakes, which is enigmatic given their relative remoteness from human disturbance. We suggest that warming-induced changes in redox conditions that promote nutrient release from sediments warrant more attention. Warming associated with climate change reduces oxygen content and hastens microbial processes, enhancing release of nutrients which can be intercepted by the benthic algae before reaching the water column. Warming effects may be particularly noticeable in high-elevation lakes that hold less oxygen at saturation, are warming more rapidly than lowland lakes, and can receive relatively high solar radiation.
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Abstract
The presence of aerosols is intimately linked to the global energy budget and the composition of a planet's atmosphere. Their ability to reflect incoming light prevents energy from being deposited into the atmosphere, and they shape the spectra of exoplanets. We observed five near-infrared secondary eclipses of WASP-80b with the Wide Field Camera 3 (WFC3) aboard the Hubble Space Telescope to provide constraints on the presence and properties of atmospheric aerosols. We detect a broadband eclipse depth of 34 +/- 10 ppm for WASP-80b. We detect a higher planetary flux than expected from thermal emission alone at 1.6 sigma, which hints toward the presence of reflecting aerosols on this planet's dayside, indicating a geometric albedo of A(g) < 0.33 at 3 sigma. We paired the WFC3 data with Spitzer data and explored multiple atmospheric models with and without aerosols to interpret this spectrum. Albeit consistent with a clear dayside atmosphere, we found a slight preference for near-solar metallicities and for dayside clouds over hazes. We exclude soot haze formation rates higher than 10(-10.7) g cm(-2)s(-1) and tholin formation rates higher than 10(-12.0) g cm(-2)s(-1) at 3 sigma. We applied the same atmospheric models to a previously published WFC3/Spitzer transmission spectrum for this planet and found weak haze formation. A single soot haze formation rate best fits both the dayside and the transmission spectra simultaneously. However, we emphasize that no models provide satisfactory fits in terms of the chi-square of both spectra simultaneously, indicating longitudinal dissimilarity in the atmosphere's aerosol composition.
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Abstract
Moons orbiting exoplanets ("exomoons") may hold clues about planet formation, migration, and habitability. In this work, we investigate the plausibility of exomoons orbiting the temperate (T eq = 294 K) giant (R = 9.2 R circle plus) planet HIP 41378 f, which has been shown to have a low apparent bulk density of 0.09 g cm-3 and a flat near-infrared transmission spectrum, hinting that it may possess circumplanetary rings. Given this planet's long orbital period (P approximate to 1.5 yr), it has been suggested that it may also host a large exomoon. Here, we analyze the orbital stability of a hypothetical exomoon with a satellite-to-planet mass ratio of 0.0123 orbiting HIP 41378 f. Combining a new software package, astroQTpy, with REBOUND and EqTide, we conduct a series of N-body and tidal migration simulations, demonstrating that satellites up to this size are largely stable against dynamical escape and collisions. We simulate the expected transit signal from this hypothetical exomoon and show that current transit observations likely cannot constrain the presence of exomoons orbiting HIP 41378 f, though future observations may be capable of detecting exomoons in other systems. Finally, we model the combined transmission spectrum of HIP 41378 f and a hypothetical moon with a low-metallicity atmosphere and show that the total effective spectrum would be contaminated at the similar to 10 ppm level. Our work not only demonstrates the feasibility of exomoons orbiting HIP 41378 f but also shows that large exomoons may be a source of uncertainty in future high-precision measurements of exoplanet systems.
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Abstract
Stem cells regenerate differentiated cells to maintain and repair tissues and organs. They also replenish themselves, i.e. self-renewal, for the regenerative process to last a lifetime. How stem cells renew is of critical biological and medical significance. Here we use the skeletal muscle stem cell (MuSC) to study this process. Using a combination of genetic, molecular, and biochemical approaches, we show that MPP7, AMOT, and TAZ/YAP form a complex that activates a common set of target genes. Among these targets, Carm1 can direct MuSC renewal. In the absence of MPP7, TAZ can support regenerative progenitors and activate Carm1 expression, but not to a level needed for self-renewal. Facilitated by the actin polymerization-responsive AMOT, TAZ recruits the L27 domain of MPP7 to up-regulate Carm1 to the level necessary to drive MuSC renewal. The promoter of Carm1, and those of other common downstream genes, also contain binding site(s) for YY1. We further demonstrate that the L27 domain of MPP7 enhances the interaction between TAZ and YY1 to activate Carm1. Our results define a renewal transcriptional program embedded within the progenitor program, by selectively up-regulating key gene(s) within the latter, through the combination of protein interactions and in a manner dependent on the promoter context.
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Abstract
In many eukaryotic algae, CO2 fixation by Rubisco is enhanced by a CO2-concentrating mechanism, which utilizes a Rubisco-rich organelle called the pyrenoid. The pyrenoid is traversed by a network of thylakoid-membranes called pyrenoid tubules, proposed to deliver CO2. In the model alga Chlamydomonas reinhardtii (Chlamydomonas), the pyrenoid tubules have been proposed to be tethered to the Rubisco matrix by a bestrophin-like transmembrane protein, BST4. Here, we show that BST4 forms a complex that localizes to the pyrenoid tubules. A Chlamydomonas mutant impaired in the accumulation of BST4 (bst4) formed normal pyrenoid tubules and heterologous expression of BST4 in Arabidopsis thaliana did not lead to the incorporation of thylakoids into a reconstituted Rubisco condensate. Chlamydomonas bst4 mutant did not show impaired growth at air level CO2. By quantifying the non-photochemical quenching (NPQ) of chlorophyll fluorescence, we show that bst4 displays a transiently lower thylakoid lumenal pH during dark to light transition compared to control strains. When acclimated to high light, bst4 had sustained higher NPQ and elevated levels of light-induced H2O2 production. We conclude that BST4 is not a tethering protein, but rather is an ion channel involved in lumenal pH regulation possibly by mediating bicarbonate transport across the pyrenoid tubules.
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Abstract
Adaptation to new environments can be impeded if beneficial phenotype combinations cannot coexist due to genetic constraints. To understand how such constraints may hinder plant adaptation to future climates, we compiled a comprehensive database of traits of Arabidopsis thaliana and estimated phenotypic natural selection in common gardens in its native distribution with rainfall limitation treatments. We found a natural selection conflict in drought environments as two drought-adaptive strategies, escape and avoidance, are mutually exclusive in A. thaliana. Traits underlying such strategies, such as flowering time, growth rate, and water use efficiency, are genetically correlated, and we identify novel loci involved in such correlation experiencing antagonistic natural selection. This empirical evidence shows that these adaptive strategies in natural populations are mutually exclusive due to strong genetic correlations amongst traits that limit the possible combinations of phenotypes. Given projections that future climates will become hotter and drier in many temperate regions, we expect an increasing conflict in natural selection among adaptive traits that could slow down or prevent adaptation. Our study underscores the importance of accounting for evolutionary genetic constraints when predicting how species may respond to a changing climate.
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