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Abstract
Plant disease resistance involves both detection of microbial molecular patterns by cell-surface pattern recognition receptors and detection of pathogen effectors by intracellular NLR immune receptors. NLRs are classified as sensor NLRs, involved in effector detection, or helper NLRs required for sensor NLR signaling. TIR-domain-containing sensor NLRs (TNLs) require helper NLRs NRG1 and ADR1 for resist-ance, and helper NLR activation of defense requires the lipase-domain proteins EDS1, SAG101, and PAD4. Previously, we found that NRG1 associates with EDS1 and SAG101 in a TNL activation-dependent manner [X. Sun et al., Nat. Commun. 12, 3335 (2021)]. We report here how the helper NLR NRG1 associates with itself and with EDS1 and SAG101 during TNL-initiated immunity. Full immunity requires coactivation and mutual potentiation of cell-surface and intracellular immune recep-tor-initiated signaling [B. P. M. Ngou, H.-K. Ahn, P. Ding, J. D. G. Jones, Nature 592, 110-115 (2021), M. Yuan et al., Nature 592, 105-109 (2021)]. We find that while activation of TNLs is sufficient to promote NRG1-EDS1-SAG101 interac-tion, the formation of an oligomeric NRG1-EDS1-SAG101 resistosome requires the additional coactivation of cell-surface receptor-initiated defense. These data suggest that NRG1-EDS1-SAG101 resistosome formation in vivo is part of the mechanism that links intracellular and cell-surface receptor signaling pathways.
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Marilyn Fogel
October 03, 2022
Awards

Carnegie’s Marilyn Fogel Posthumously Honored by AGU For Legacy of Interdisciplinary Research

Abstract
The interaction between supermassive black hole (SMBH) feedback and the circumgalactic medium (CGM) continues to be an open question in galaxy evolution. In our study, we use smoothed particle hydrodynamics simulations to explore the impact of SMBH feedback on galactic metal retention and the motion of metals and gas into and through the CGM of L-* galaxies. We examine 140 galaxies from the 25 Mpc cosmological volume Romulus25, with stellar masses between log(M-*/M-circle dot) = 9.5-11.5. We measure the fraction of metals remaining in the interstellar medium (ISM) and CGM of each galaxy and calculate the expected mass of each SMBH based on the M-BH-sigma relation (Kormendy & Ho 2013). The deviation of each SMBH from its expected mass, Delta M-BH, is compared to the potential of its host via sigma. We find that SMBHs with accreted mass above M-BH-sigma are more effective at removing metals from the ISM than undermassive SMBHs in star-forming galaxies. Overall, overmassive SMBHs suppress the total star formation of their host galaxies and more effectively move metals from the ISM into the CGM. However, we see little to no evacuation of gas from the CGM out of their halos, in contrast with other simulations. Finally, we predict that C iv column densities in the CGM of L-* galaxies are unlikely to depend on host galaxy SMBH mass. Our results show that the scatter in the low-mass end of the M-BH-sigma relation may indicate how effective an SMBH is in the local redistribution of mass in its host galaxy.
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Abstract
All animals and plants likely require interactions with microbes, often in strong, persistent symbiotic associations. While the recognition of this phenomenon has been slow in coming, it will impact most, if not all, subdisciplines of biology.
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Abstract
At a rapid pace, biologists are learning the many ways in which resident microbes influence, and sometimes even control, their hosts to shape both health and disease. Understanding the biochemistry behind these interactions promises to reveal completely novel and targeted ways of counteracting disease processes. However, in our protocols and publications, we continue to describe these new results using a language that originated in a completely different context. This language developed when microbial interactions with hosts were perceived to be primarily pathogenic, as threats that had to be vanquished. Biomedicine had one dominating thought: winning this war against microorganisms. Today, we know that beyond their defensive roles, host tissues, especially epithelia, are vital to ensuring association with the normal microbiota, the communities of microbes that persistently live with the host. Thus, we need to adopt a language that better encompasses the newly appreciated importance of host-microbiota associations. We also need a language that frames the onset and progression of pathogenic conditions within the context of the normal microbiota. Such a reimagined lexicon should make it clear, from the very nature of its words, that microorganisms are primarily vital to our health, and only more rarely the cause of disease.This article is part of the theme issue 'Sculpting the microbiome: how host factors determine and respond to microbial colonization'.
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Abstract
We present deep Hubble Space Telescope photometry of 10 targets from Treasury Program GO-14734, including six confirmed ultrafaint dwarf (UFD) galaxies, three UFD candidates, and one likely globular cluster. Six of these targets are satellites of, or have interacted with, the Large Magellanic Cloud (LMC). We determine their structural parameters using a maximum-likelihood technique. Using our newly derived half-light radius (r h ) and V-band magnitude (M V ) values in addition to literature values for other UFDs, we find that UFDs associated with the LMC do not show any systematic differences from Milky Way UFDs in the magnitude-size plane. Additionally, we convert simulated UFD properties from the literature into the M V -r h observational space to examine the abilities of current dark matter (DM) and baryonic simulations to reproduce observed UFDs. Some of these simulations adopt alternative DM models, thus allowing us to also explore whether the M V -r h plane could be used to constrain the nature of DM. We find no differences in the magnitude-size plane between UFDs simulated with cold, warm, and self-interacting DM, but note that the sample of UFDs simulated with alternative DM models is quite limited at present. As more deep, wide-field survey data become available, we will have further opportunities to discover and characterize these ultrafaint stellar systems and the greater low surface-brightness universe.
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Abstract
With the advent of toroidal and double-stage diamond anvil cells (DACs), pressures between 4 and 10 Mbar can be achieved under static compression, however, the ability to explore diverse sample assemblies is limited on these micron-scale anvils. Adapting the toroidal DAC to support larger sample volumes offers expanded capabilities in physics, chemistry, and planetary science: including, characterizing materials in soft pressure media to multi-megabar pressures, synthesizing novel phases, and probing planetary assemblages at the interior pressures and temperatures of super-Earths and sub-Neptunes. Here we have continued the exploration of larger toroidal DAC profiles by iteratively testing various torus and shoulder depths with central culet diameters in the 30-50 mu m range. We present a 30 mu m culet profile that reached a maximum pressure of 414(1) GPa based on a Pt scale. The 300 K equations of state fit to our P-V data collected on gold and rhenium are compatible with extrapolated hydrostatic equations of state within 1% up to 4 Mbar. This work validates the performance of these large-culet toroidal anvils to > 4 Mbar and provides a promising foundation to develop toroidal DACs for diverse sample loading and laser heating.
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Abstract
Partitioning experiments and the chemistry of iron meteorites indicate that the light element nitrogen could be sequestered into the metallic core of rocky planets during core-mantle differentiation. The thermal conductivity and the mineralogy of the Fe-N system under core conditions could therefore influence the planetary cooling, core crystallization, and evolution of the intrinsic magnetic field of rocky planets. Limited experiments have been conducted to study the thermal properties and phase relations of Fe-N components under planetary core conditions, such as those found in the Moon, Mercury, and Ganymede. In this study, we report results from high-pressure experiments involving electrical resistivity measurements of Fe-N phases at a pressure of 5 GPa and temperatures up to 1400 K. Four Fe-N compositions, including Fe-10%N, Fe-6.4%N, Fe-2%N, and Fe-1%N (by weight percent), were prepared and subjected to recovery experiments at 5 GPa and 1273 K. These experiments show that Fe-10%N and Fe-6.4%N form a single hexagonal close-packed phase (epsilon-nitrides), while Fe-2%N and Fe-1%N exhibit a face-centered cubic structure (gamma-Fe). In separate experiments, the resistivity data were collected during the cooling after compressing the starting materials to 5 GPa and heating to similar to 1400 K. The resistivity of all compositions, similar to the pure gamma-Fe, exhibits weak temperature dependence. We found that N has a strong effect on the resistivity of metallic Fe under rocky planetary core conditions compared to other potential light elements such as Si. The temperature-dependence of the resistivity also revealed high-pressure phase transition points in the Fe-N system. A congruent reaction, epsilon reversible arrow gamma', occurs at similar to 673 K in Fe-6.4%N, which is similar to 280 K lower than that at ambient pressure. Furthermore, the resistivity data provided constraints on the high-pressure phase boundary of the polymorphic transition, gamma reversible arrow alpha, and an eutectoid equilibrium of gamma' reversible arrow alpha + epsilon. The data, along with the recently reported phase equilibrium experiments at high pressures, enable construction of a phase diagram of the Fe-N binary system at 5 GPa.
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Jennifer Kasbohm headshot
May 27, 2024
Organizational News

Geochronologist Jennifer Kasbohm joins Carnegie Science as new Staff Scientist

Abstract
We present a method of extrapolating the spectroscopic behavior of Type Ia supernovae (SNe Ia) in the near-infrared (NIR) wavelength regime up to 2.30 mu m using optical spectroscopy. Such a process is useful for accurately estimating K-corrections and other photometric quantities of SNe Ia in the NIR. A principal component analysis is performed on data consisting of Carnegie Supernova Project I & II optical and NIR FIRE spectra to produce models capable of making these extrapolations. This method differs from previous spectral template methods by not parameterizing models strictly by photometric light-curve properties of SNe Ia, allowing for more flexibility of the resulting extrapolated NIR flux. A difference of around -3.1% to -2.7% in the total integrated NIR flux between these extrapolations and the observations is seen here for most test cases including Branch core-normal and shallow-silicon subtypes. However, larger deviations from the observation are found for other tests, likely due to the limited high-velocity and broad-line SNe Ia in the training sample. Maximum-light principal components are shown to allow for spectroscopic predictions of the color-stretch light-curve parameter, s BV, within approximately +/- 0.1 units of the value measured with photometry. We also show these results compare well with NIR templates, although in most cases the templates are marginally more fitting to observations, illustrating a need for more concurrent optical+NIR spectroscopic observations to truly understand the diversity of SNe Ia in the NIR.
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