the sea anemone Aiptasia pallida that is hosting the algae, which are responsible for the red fluorescence spots observed in the body of the animal.  Image courtesy of Tingting Xiang.
Palo Alto, CA—What factors govern algae’s success as “tenants” of their coral hosts both under optimal conditions and when oceanic temperatures rise? A Victoria University of...
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A teosinte plant growing in a corn field on the Stanford University campus, courtesy of Yongxian Lu.
Palo Alto, CA— Determining how one species becomes distinct from another has been a subject of fascination dating back to Charles Darwin. New research led by Carnegie’s Matthew Evans and...
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Plant cells under microscope. Shutterstock.
Palo Alto, CA—Photosynthesis makes our atmosphere oxygen-rich and forms the bedrock of our food supply. But under changing or stressful environmental conditions, the photosynthetic process can...
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The Office of the President has selected two new Carnegie Venture Grants. Peter Driscoll of the Department of Terrestrial Magnetism and Sally June Tracy of the Geophysical Laboratory were awarded a...
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Chlamydomonas
Palo Alto, CA—The creation of new library of mutants of the single-celled photosynthetic green alga Chlamydomonas reinhardtii enabled a Carnegie- and Princeton University-led team of...
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Heather Meyer, a postdoctoral fellow in David Ehrhardt’s Plant Biology lab since 2016, has been awarded Carnegie’s twelfth Postdoctoral Innovation and Excellence Award. These prizes are...
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Washington, DC— Carnegie’s Winslow Briggs, a giant in the field of plant biology who explained how seedlings grow toward light, died on February 11 at Stanford University Medical Center....
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Sue Rhee, Thomas Clandinin and Miriam B. Goodman discuss the NeuroPlant project over a tobacco plant in the greenhouse. (Image credit: L.A. Cicero)
Stanford, CA—For millennia, humanity has used medicinal plants and plant-based compounds to treat a variety of neurological ailments including epilepsy, mania, migraines, and bipolar disorder....
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Several years ago, Carnegie researchers  constructed genetically encoded FRET sensors for a variety of important molecules such as glucose and glutamate. The centerpiece of these sensors is a recognition element derived from the superfamily of bacterial binding protiens called periplasmic...
Explore this Project
Revolutionary progress in understanding plant biology is being driven through advances in DNA sequencing technology. Carnegie plant scientists have played a key role in the sequencing and genome annotation efforts of the model plant Arabidopsis thaliana and the soil alga ...
Explore this Project
Fresh water constitutes less than 1% of the surface water on earth, yet the importance of this simple molecule to all life forms is immeasurable. Water represents the most vital reagent for chemical reactions occurring in a cell. In plants, water provides the structural support necessary for plant...
Explore this Project
Matthew Evans wants to provide new tools for plant scientists to engineer better seeds for human needs. He focuses on one of the two phases to their life cycle. In the first phase, the sporophyte is the diploid generation—that is with two similar sets of chromosomes--that undergoes meiosis to...
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Devaki Bhaya wants to understand how environmental stressors, such as light, nutrients, and viral attacks are sensed by and affect photosynthetic microorganisms. She is also interested in understanding the mechanisms behind microorganism movements, and how individuals in groups communicate, evolve...
Meet this Scientist
Plants are not as static as you think. David Ehrhardt combines confocal microscopy with novel visualization methods to see the three-dimensional movement  within live plant cells to reveal the other-worldly cell choreography that makes up plant tissues. These methods allow his group to explore...
Meet this Scientist
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AudioStanford, CA— Photosynthesis provides fixed carbon and energy for nearly all life on Earth, yet many aspects of this fascinating process remain mysterious. For example, little is known about how...
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AudioStanford, CA—Everyone’s heard of the birds and the bees. But that old expression leaves out the flowers that are being fertilized. The fertilization process for flowering plants is particularly...
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Carnegie Plant Biology Acting Director Sue Rhee and staff scientist José Dinneny and their labs are part of a research effort led by The Donald Danforth Plant Science...
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Explore Carnegie Science

the sea anemone Aiptasia pallida that is hosting the algae, which are responsible for the red fluorescence spots observed in the body of the animal.  Image courtesy of Tingting Xiang.
June 19, 2019

Palo Alto, CA—What factors govern algae’s success as “tenants” of their coral hosts both under optimal conditions and when oceanic temperatures rise? A Victoria University of Wellington-led team of experts that includes Carnegie’s Arthur Grossman investigates this question.

Corals are marine invertebrates that build large exoskeletons from which colorful reefs are constructed. But this reef-building is only possible because of a mutually beneficial relationship between the coral and various species of single-celled algae called dinoflagellates that live inside the cells of coral polyps.

These algae are photosynthetic, which means that like

A teosinte plant growing in a corn field on the Stanford University campus, courtesy of Yongxian Lu.
May 24, 2019

Palo Alto, CA— Determining how one species becomes distinct from another has been a subject of fascination dating back to Charles Darwin. New research led by Carnegie’s Matthew Evans and published in Nature Communications elucidates the mechanism that keeps maize distinct from its ancient ancestor grass, teosinte.

Speciation requires isolation. Sometimes this isolation is facilitated by geography, such as mountains chains or islands that divide two populations and prevent them from interbreeding until they become different species. But in other instances, the barriers separating species are physiological factors that prevent them from successfully mating, or from

Plant cells under microscope. Shutterstock.
May 23, 2019

Palo Alto, CA—Photosynthesis makes our atmosphere oxygen-rich and forms the bedrock of our food supply. But under changing or stressful environmental conditions, the photosynthetic process can become unbalanced, resulting in an excess of highly reactive oxygen molecules that could cause cellular damage if they aren’t neutralized.  

New work in Proceedings of the National Academy of Sciences led by Carnegie’s Shai Saroussi and Arthur Grossman explores how the photosynthetic algae Chlamydomonas shields itself from this potential danger. Understanding how plants minimize self-inflicted harm in this scenario could help scientists engineer crops with improved

May 16, 2019

The Office of the President has selected two new Carnegie Venture Grants. Peter Driscoll of the Department of Terrestrial Magnetism and Sally June Tracy of the Geophysical Laboratory were awarded a venture grant for their proposal Carbon-rich Super-Earths: Constraining Internal Structure from Dynamic Compression Experiments. Plant Biology’s Sue Rhee and Global Ecology’s Joe Berry and Jen Johnson were awarded a Venture Grant for their project Thermo-adaptation of Photosynthesis in Extremophilic Desert Plants.

Carnegie Science Venture Grants ignore conventional boundaries and bring together cross-disciplinary researchers with fresh eyes to explore different questions.

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Revolutionary progress in understanding plant biology is being driven through advances in DNA sequencing technology. Carnegie plant scientists have played a key role in the sequencing and genome annotation efforts of the model plant Arabidopsis thaliana and the soil alga Chlamydomonas reinhardtii. Now that many genomes from algae to mosses and trees are publicly available, this information can be mined using bioinformatics to build models to understand gene function and ultimately for designing plants for a wide spectrum of applications.

 Carnegie researchers have pioneered a genome-wide gene association network Aranet that can assign functions

Fresh water constitutes less than 1% of the surface water on earth, yet the importance of this simple molecule to all life forms is immeasurable. Water represents the most vital reagent for chemical reactions occurring in a cell. In plants, water provides the structural support necessary for plant growth. It acts as the carrier for nutrients absorbed from the soil and transported to the shoot. It also provides the chemical components necessary to generate sugar and biomass from light and carbon dioxide during photosynthesis. While the importance of water to plants is clear, an understanding as to how plants perceive water is limited. Most studies have focused on environmental conditions

Today, humanity is increasingly aware of the impact it has on the environment and the difficulties caused when the environment impacts our communities. Environmental change can be particularly harsh when the plants we use for food, fuel, feed and fiber are affected by this change. High salinity is an agricultural contaminant of increasing significance. Not only does this limit the land available for use in agriculture, but in land that has been used for generations, the combination of irrigation and evaporation gradually leads to increasing soil salinity.

The Dinneny lab focuses on understanding how developmental processes such as cell-type specification regulate responses to

Several years ago, Carnegie researchers  constructed genetically encoded FRET sensors for a variety of important molecules such as glucose and glutamate. The centerpiece of these sensors is a recognition element derived from the superfamily of bacterial binding protiens called periplasmic binding protein (PBPs), proteins that are primary receptors for moving chemicals  for hundreds of different small molecules. PBPs are ideally suited for sensor construction. The scientists fusie individual PBPs with a pair of variants and produced a large set of sensors, e.g. for sugars like maltose, ribose and glucose or for the neurotransmitter glutamate. These sensors have been adopted for

Plants are essential to life on Earth and provide us with food, fuel, clothing, and shelter.  Despite all this, we know very little about how they do what they do. Even for the best-studied species, such as Arabidopsis thaliana --a wild mustard studied in the lab--we know about less than 20% of what its genes do and how or why they do it. And understanding this evolution can help develop new crop strains to adapt to climate change.  

Sue Rhee wants to uncover the molecular mechanisms underlying adaptive traits in plants to understand how these traits evolved. A bottleneck has been the limited understanding of the functions of most plant genes. Rhee’s group is

Evolutionary geneticist Moises Exposito-Alonso joins the Department of Plant Biology as a staff associate in the summer of 2019. He investigates whether and how plants will evolve to keep pace with climate change by conducting large-scale ecological and genome sequencing experiments. He also develops computational methods to derive fundamental principles of evolution, such as how fast natural populations acquire new mutations and how past climates shaped continental-scale biodiversity patterns. His goal is to use these first principles and computational approaches to forecast evolutionary outcomes of populations under climate change to anticipate potential future

Understanding how plants grow can lead to improving crops.  Plant scientist Kathryn Barton, who joined Carnegie in 2001, investigates just that: what controls the plant’s body plan, from  the time it’s an embryo to its adult leaves. These processes include how plant parts form different orientations, from top to bottom, and different poles. She looks at regulation by small RNA’s, the function of small so-called Zipper proteins, and how hormone biosynthesis and response controls the plant’s growth.

Despite an enormous variety in leaf shape and arrangement, the basic body plan of plants is about the same: stems and leaves alternate in

Plants are not as static as you think. David Ehrhardt combines confocal microscopy with novel visualization methods to see the three-dimensional movement  within live plant cells to reveal the other-worldly cell choreography that makes up plant tissues. These methods allow his group to explore cell-signaling and cell-organizational events as they unfold.

These methods allow his lab to investigate plant cell development and structure and molecular genetics to understand the organization and dynamic behaviors of molecules and organelles. The group tackles how cells generate asymmetries and specific shapes. A current focus is how the cortical microtubule cytoskeleton— an