March 27, 2014 Dr. José R. Dinneny, Carnegie Institution for Science, Department of Plant Biology We see plants everywhere in our daily lives, but half of the plant, the root system, is hidden...
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AudioStanford, CA— Evolution is based on diversity, and sexual reproduction is key to creating a diverse population that secures...
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AudioStanford, CA— As every gardner knows, nitrogen is crucial for a plant’s growth. But nitrogen absorption is inefficient. This means that...
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Stanford, CA—Carnegie’s Li-Quing Chen, recipient of a Tansley Medal for Excellence in Plant Science, announced late last year, is honored with an editorial and minireview in New Phytologist this...
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AudioStanford, CA—Inside every plant cell, a cytoskeleton provides an interior scaffolding to direct construction of the cell’s walls, and...
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Washington, D.C.— Postdoctoral fellow, Rubén Rellán-Álvarez at the Department of Plant Biology has been awarded the prestigious Marschner Young Scientist Award by the International Plant Nutrition...
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Stanford, CA— Coral reefs are tremendously important for ocean biodiversity, as well as for the economic and aesthetic value they provide to their surrounding communities. Unfortunately they have...
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Washington, D.C. --The Arabidopsis Information Resource (TAIR), a database of genetic and molecular biology data for the laboratory plant Arabidopsis thaliana, is one of the most widely used plant...
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Carnegie will receive Phase II funding through Grand Challenges Explorations, an initiative created by the Bill & Melinda Gates Foundation that enables individuals worldwide to test bold ideas to address persistent health and development challenges. Department of Plant Biology Director...
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Today, humanity is increasingly aware of the impact it has on the environment and the difficulties caused when the environment impacts our communities. Environmental change can be particularly harsh when the plants we use for food, fuel, feed and fiber are affected by this change. High salinity is...
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Revolutionary progress in understanding plant biology is being driven through advances in DNA sequencing technology. Carnegie plant scientists have played a key role in the sequencing and genome annotation efforts of the model plant Arabidopsis thaliana and the soil alga ...
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Plants are not as static as you think. David Ehrhardt combines confocal microscopy with novel visualization methods to see the three-dimensional movement  within live plant cells to reveal the other-worldly cell choreography that makes up plant tissues. These methods allow his group to explore...
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Plants are essential to life on Earth and provide us with food, fuel, clothing, and shelter.  Despite all this, we know very little about how they do what they do. Even for the best-studied species, such as Arabidopsis thaliana --a wild mustard studied in the lab--we know about less than 20%...
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Matthew Evans wants to provide new tools for plant scientists to engineer better seeds for human needs. He focuses on one of the two phases to their life cycle. In the first phase, the sporophyte is the diploid generation—that is with two similar sets of chromosomes--that undergoes meiosis to...
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Stanford, CA—Carnegie’s Alexander Jones will receive the Tansley Medal for Excellence in Plant Science. The honor includes publishing a short review, an editorial written about his work in the...
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Stanford, CA— With a growing world population and a changing climate, understanding how agriculturally important plants respond to drought is crucial. New work from a team led by Carnegie’s José...
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Stanford, CA— Plant roots are fascinating plant organs – they not only anchor the plant, but are also the world’s most efficient mining companies. Roots live in darkness and direct the activities of...
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Explore Carnegie Science

A teosinte plant growing in a corn field on the Stanford University campus, courtesy of Yongxian Lu.
May 24, 2019

Palo Alto, CA— Determining how one species becomes distinct from another has been a subject of fascination dating back to Charles Darwin. New research led by Carnegie’s Matthew Evans and published in Nature Communications elucidates the mechanism that keeps maize distinct from its ancient ancestor grass, teosinte.

Speciation requires isolation. Sometimes this isolation is facilitated by geography, such as mountains chains or islands that divide two populations and prevent them from interbreeding until they become different species. But in other instances, the barriers separating species are physiological factors that prevent them from successfully mating, or from

Plant cells under microscope. Shutterstock.
May 23, 2019

Palo Alto, CA—Photosynthesis makes our atmosphere oxygen-rich and forms the bedrock of our food supply. But under changing or stressful environmental conditions, the photosynthetic process can become unbalanced, resulting in an excess of highly reactive oxygen molecules that could cause cellular damage if they aren’t neutralized.  

New work in Proceedings of the National Academy of Sciences led by Carnegie’s Shai Saroussi and Arthur Grossman explores how the photosynthetic algae Chlamydomonas shields itself from this potential danger. Understanding how plants minimize self-inflicted harm in this scenario could help scientists engineer crops with improved

May 16, 2019

The Office of the President has selected two new Carnegie Venture Grants. Peter Driscoll of the Department of Terrestrial Magnetism and Sally June Tracy of the Geophysical Laboratory were awarded a venture grant for their proposal Carbon-rich Super-Earths: Constraining Internal Structure from Dynamic Compression Experiments. Plant Biology’s Sue Rhee and Global Ecology’s Joe Berry and Jen Johnson were awarded a Venture Grant for their project Thermo-adaptation of Photosynthesis in Extremophilic Desert Plants.

Carnegie Science Venture Grants ignore conventional boundaries and bring together cross-disciplinary researchers with fresh eyes to explore different questions.

Chlamydomonas
March 21, 2019

Palo Alto, CA—The creation of new library of mutants of the single-celled photosynthetic green alga Chlamydomonas reinhardtii enabled a Carnegie- and Princeton University-led team of plant scientists to identify more than 300 genes that are potentially required for photosynthesis. Photosynthesis is the process by which plants, algae, and some bacteria convert energy from sunlight into carbohydrates—filling our planet’s atmosphere with oxygen as a byproduct.

Their findings are published this week in Nature Genetics.

Chlamydomonas represents a group of algae that are found around the globe in fresh and saltwater, moist soil, and even snow. They are

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Today, humanity is increasingly aware of the impact it has on the environment and the difficulties caused when the environment impacts our communities. Environmental change can be particularly harsh when the plants we use for food, fuel, feed and fiber are affected by this change. High salinity is an agricultural contaminant of increasing significance. Not only does this limit the land available for use in agriculture, but in land that has been used for generations, the combination of irrigation and evaporation gradually leads to increasing soil salinity.

The Dinneny lab focuses on understanding how developmental processes such as cell-type specification regulate responses to

Several years ago, Carnegie researchers  constructed genetically encoded FRET sensors for a variety of important molecules such as glucose and glutamate. The centerpiece of these sensors is a recognition element derived from the superfamily of bacterial binding protiens called periplasmic binding protein (PBPs), proteins that are primary receptors for moving chemicals  for hundreds of different small molecules. PBPs are ideally suited for sensor construction. The scientists fusie individual PBPs with a pair of variants and produced a large set of sensors, e.g. for sugars like maltose, ribose and glucose or for the neurotransmitter glutamate. These sensors have been adopted for

Fresh water constitutes less than 1% of the surface water on earth, yet the importance of this simple molecule to all life forms is immeasurable. Water represents the most vital reagent for chemical reactions occurring in a cell. In plants, water provides the structural support necessary for plant growth. It acts as the carrier for nutrients absorbed from the soil and transported to the shoot. It also provides the chemical components necessary to generate sugar and biomass from light and carbon dioxide during photosynthesis. While the importance of water to plants is clear, an understanding as to how plants perceive water is limited. Most studies have focused on environmental conditions

Revolutionary progress in understanding plant biology is being driven through advances in DNA sequencing technology. Carnegie plant scientists have played a key role in the sequencing and genome annotation efforts of the model plant Arabidopsis thaliana and the soil alga Chlamydomonas reinhardtii. Now that many genomes from algae to mosses and trees are publicly available, this information can be mined using bioinformatics to build models to understand gene function and ultimately for designing plants for a wide spectrum of applications.

 Carnegie researchers have pioneered a genome-wide gene association network Aranet that can assign functions

Evolutionary geneticist Moises Exposito-Alonso joins the Department of Plant Biology as a staff associate in the summer of 2019. He investigates whether and how plants will evolve to keep pace with climate change by conducting large-scale ecological and genome sequencing experiments. He also develops computational methods to derive fundamental principles of evolution, such as how fast natural populations acquire new mutations and how past climates shaped continental-scale biodiversity patterns. His goal is to use these first principles and computational approaches to forecast evolutionary outcomes of populations under climate change to anticipate potential future

Understanding how plants grow can lead to improving crops.  Plant scientist Kathryn Barton, who joined Carnegie in 2001, investigates just that: what controls the plant’s body plan, from  the time it’s an embryo to its adult leaves. These processes include how plant parts form different orientations, from top to bottom, and different poles. She looks at regulation by small RNA’s, the function of small so-called Zipper proteins, and how hormone biosynthesis and response controls the plant’s growth.

Despite an enormous variety in leaf shape and arrangement, the basic body plan of plants is about the same: stems and leaves alternate in

Devaki Bhaya wants to understand how environmental stressors, such as light, nutrients, and viral attacks are sensed by and affect photosynthetic microorganisms. She is also interested in understanding the mechanisms behind microorganism movements, and how individuals in groups communicate, evolve, share resources. To these ends, she focuses on one-celled, aquatic cyanobacteria, in the lab with model organisms and with organisms in naturally occurring communities.

 Phototaxis is the ability of organisms to move directionally in response to a light source.  Many cyanobacteria exhibit phototaxis, both towards and away from light. The ability to move into optimal light

Arthur Grossman believes that the future of plant science depends on research that spans ecology, physiology, molecular biology and genomics. As such, work in his lab has been extremely diverse. He identifies new functions associated with photosynthetic processes, the mechanisms of coral bleaching and the impact of temperature and light on the bleaching process.

He also has extensively studied the blue-green algae Chlamydomonas genome and is establishing methods for examining the set of RNA molecules and the function of proteins involved in their photosynthesis and acclimation. He also studies the regulation of sulfur metabolism in green algae and plants.  

Grossman