Megan Ruffley
Palo Alto, CA—Carnegie’s Megan Ruffley was awarded a prestigious Plant Genome Postdoctoral Research Fellowship in Biology...
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Toxic "red tide" algal bloom. Image purchased from Shutterstock.
Palo Alto, CA—New work from a Stanford University-led team of researchers including Carnegie’s Arthur Grossman and Tingting Xiang unravels a longstanding mystery about the relationship...
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Photo of flowering Arabidopsis thaliana purchased from Shutterstock.
Palo Alto, CA— Understanding how plants respond to stressful environmental conditions is crucial to developing effective strategies for protecting important agricultural crops from a changing...
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Figure from Energy and Environmental Science paper
Palo Alto, CA— What if we could increase a plant’s productivity by modifying the light to which it is exposed? This could increase the yield of important food and biofuel crops and also...
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Senna tora photo courtesy of Shutterstock.
Palo Alto, CA— Anthraquinones are a class of naturally occurring compounds prized for their medicinal properties, as well as for other applications, including ecologically friendly dyes....
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PolyP courtesy of Arthur Grossman and Emanuel Sanz-Luque
Palo Alto, CA— In a changing climate, understanding how organisms respond to stress conditions is increasingly important. New work led by Carnegie’s Arthur Grossman and Emanuel Sanz-Luque...
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Moises Exposito-Alonso
Palo Alto, CA— Carnegie’s Moises Exposito-Alonso has been selected for a National Institutes of Health Director’s Early Independence Award, which recognizes “outstanding...
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Pennycress
Palo Alto, CA— Carnegie’s Sue Rhee and Moises Exposito-Alonso are leading members of an initiative to identify genes related to stress tolerance in the mustard plant field pennycress....
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Revolutionary progress in understanding plant biology is being driven through advances in DNA sequencing technology. Carnegie plant scientists have played a key role in the sequencing and genome annotation efforts of the model plant Arabidopsis thaliana and the soil alga ...
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Plants are not as static as you think. David Ehrhardt combines confocal microscopy with novel visualization methods to see the three-dimensional movement  within live plant cells to reveal the other-worldly cell choreography that makes up plant tissues. These methods allow his group to explore...
Meet this Scientist
Zhiyong Wang was appointed acting director of Department of Plant Biology in 2018. Wang’s research aims to understand how plant growth is controlled by environmental and endogenous signals. Being sessile, plants respond environmental changes by altering their growth behavior. As such, plants...
Meet this Scientist
Plants are essential to life on Earth and provide us with food, fuel, clothing, and shelter.  Despite all this, we know very little about how they do what they do. Even for the best-studied species, such as Arabidopsis thaliana --a wild mustard studied in the lab--we know about less than 20%...
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During the daytime, plants convert the Sun’s energy into sugars using photosynthesis, a complex, multi-stage biochemical process. New work from a team including Carnegie’s Mark Heinnickel...
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Audio Stanford, CA— As every gardner knows, nitrogen is crucial for a plant’s growth. But nitrogen absorption is inefficient. This means that on the scale of food crops, adding significant levels of...
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Audio Stanford, CA—Everyone’s heard of the birds and the bees. But that old expression leaves out the flowers that are being fertilized. The fertilization process for flowering plants is particularly...
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Explore Carnegie Science

Margaret McFall-Ngai
November 17, 2021

Washington, DC—Pioneering microbiome specialist Margaret McFall-Ngai has been named the inaugural director of Carnegie’s newly launched research division focused on life and environmental sciences, which will deploy an integrated, molecular-to-global approach to tackling the challenges of sustainability, resilience, and adaptation to a changing climate. McFall-Ngai will join the institution in January, 2022, from the University of Hawai‘i at Mānoa, where she is a professor at the Pacific Biosciences Research Center’s Kewalo Marine Laboratory and the center’s director emerita.

“Margaret’s exemplary research and groundbreaking vision are the

Rose rust on plant leaves. Image purchased from Shutterstock.
October 26, 2021

Palo Alto, CA—New work led by Carnegie’s Kangmei Zhao and Sue Rhee reveals a new mechanism by which plants are able to rapidly activate defenses against bacterial infections. This understanding could inspire efforts to improve crop yields and combat global hunger.

“Understanding how plants respond to stressful environments is critical for developing strategies to protect important food and biofuel crops from a changing climate,” Rhee explained. 

Published in eLife, new work from Zhao and Rhee, along with Carnegie’s Benjamin Jin and Stanford University’s Deze Kong and Christina Smolke, investigated how production of a plant defense

October 4, 2021

Palo Alto, CA—Carnegie’s Devaki Bhaya is part of a Rice University led team that was recently awarded $2.8 million from the National Science Foundation for a five-year project to define the social order of naturally occurring microbial communities.

Unlike the bacterial clones used in laboratory research, naturally occurring bacterial populations are havens of small-scale genetic diversity, making their relationships and evolutionary dynamics of great interest to the scientific community.

“From extremophiles living in deep sea vents to the beneficial bacteria living in the human gut or in association with plant roots, microbial communities are crucial to

September 24, 2021

Palo Alto, CA—Former Carnegie Staff Associate Martin Jonikas, now an Associate Professor of Molecular Biology at Princeton University, was named one of 33 new Howard Hughes Medical Institute (HHMI) Investigators. HHMI recognized Jonikas for his research on photosynthetic algae, which could revolutionize agriculture and biofuels by making crop plants better at converting carbon dioxide from the atmosphere into usable energy sources such as sugars.

Each member of the cohort will receive roughly $9 million over a seven-year term. They were selected for “diving deep into tough questions that span the landscape of biology and medicine.”

Photosynthesis is

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Revolutionary progress in understanding plant biology is being driven through advances in DNA sequencing technology. Carnegie plant scientists have played a key role in the sequencing and genome annotation efforts of the model plant Arabidopsis thaliana and the soil alga Chlamydomonas reinhardtii. Now that many genomes from algae to mosses and trees are publicly available, this information can be mined using bioinformatics to build models to understand gene function and ultimately for designing plants for a wide spectrum of applications.

 Carnegie researchers have pioneered a genome-wide gene association network Aranet that can assign functions

Plants are essential to life on Earth and provide us with food, fuel, clothing, and shelter.  Despite all this, we know very little about how they do what they do. Even for the best-studied species, such as Arabidopsis thaliana --a wild mustard studied in the lab--we know about less than 20% of what its genes do and how or why they do it. And understanding this evolution can help develop new crop strains to adapt to climate change.  

Sue Rhee wants to uncover the molecular mechanisms underlying adaptive traits in plants to understand how these traits evolved. A bottleneck has been the limited understanding of the functions of most plant genes. Rhee’s group is

Matthew Evans wants to provide new tools for plant scientists to engineer better seeds for human needs. He focuses on one of the two phases to their life cycle. In the first phase, the sporophyte is the diploid generation—that is with two similar sets of chromosomes--that undergoes meiosis to produce cells called spores. Each spore divides forming a single set of chromosomes (haploid) --the gametophyte--which produces the sperm and egg cells.

Evans studies how the haploid genome is required for normal egg and sperm function. In flowering plants, the female gametophyte, called the embryo sac, consists of four cell types: the egg cell, the central cell, and two types of

Evolutionary geneticist Moises Exposito-Alonso joined the Department of Plant Biology as a staff associate in September 2019. He investigates whether and how plants will evolve to keep pace with climate change by conducting large-scale ecological and genome sequencing experiments. He also develops computational methods to derive fundamental principles of evolution, such as how fast natural populations acquire new mutations and how past climates shaped continental-scale biodiversity patterns. His goal is to use these first principles and computational approaches to forecast evolutionary outcomes of populations under climate change to anticipate potential future

Arthur Grossman believes that the future of plant science depends on research that spans ecology, physiology, molecular biology and genomics. As such, work in his lab has been extremely diverse. He identifies new functions associated with photosynthetic processes, the mechanisms of coral bleaching and the impact of temperature and light on the bleaching process.

He also has extensively studied the blue-green algae Chlamydomonas genome and is establishing methods for examining the set of RNA molecules and the function of proteins involved in their photosynthesis and acclimation. He also studies the regulation of sulfur metabolism in green algae and plants.  

Grossman