Washington, D.C.—Matthew Sieber, a postdoctoral fellow at the Department of Embryology, has been honored for his extraordinary accomplishments, through a new program that recognizes exceptional...
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Baltimore, MD— Reproduction is highly dependent on diet and the ability to use nutrients to grow and generate energy. This is clearly seen in women, who must provide all the nutritional building...
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San Diego, CA— Ghosts are not your typical cell biology research subjects. But scientists at the Carnegie Institution for Science and the National Institute of Child Health and Human Development (...
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The American Society for Cell Biology profiles Yixian Zheng and her recent papers on the elusive spindle matrix. "Zheng’s lab identifies new regulators in spindle assembly, all associated with the...
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Two researchers, Martin Jonikas of Carnegie’s Department of Plant Biology and Zhao Zhang of the Department of Embryology, have been awarded the New Innovator and Early Independence Awards,...
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Baltimore, MD— Every high school biology class learns about the tiny cells that comprise our bodies, as well as about many of the diverse actions that they perform. One of these actions is called...
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Baltimore, MD—Carnegie’s BioEYES K-12 science educational program launches a new center sponsored by the University of Utah, Department of Pediatrics, Pediatric Research Enterprise. The new program...
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Allan Spradling offers input to The Scientist on a paper about female Japanese rice fish producing sperm....
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The Fan laboratory studies the molecular mechanisms that govern mammalian development, using the mouse as a model. They use a combination of biochemical, molecular and genetic approaches to identify and characterize signaling molecules and pathways that control the development and maintenance of...
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The Gall laboratory studies all aspects of the cell nucleus, particularly the structure of chromosomes, the transcription and processing of RNA, and the role of bodies inside the cell nucleus, especially the Cajal body (CB) and the histone locus body (HLB). Much of the work makes use of the giant...
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In mammals, most lipids, such as fatty acids and cholesterol, are absorbed into the body via the small intestine. The complexity of the cells and fluids that inhabit this organ make it very difficult to study in a laboratory setting. The goal of the Farber lab is to better understand the cell and...
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Junior investigator Zhao Zhang joined Carnegie in November 2014. He studies how elements with the ability to “jump” around the genome, called transposons, are controlled in egg, sperm, and other somatic tissues in order to understand how transposons contribute to genomic instability and to...
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Staff associate Christoph Lepper, with colleagues, overturned previous research that identified critical genes for making muscle stem cells. It turns out that the genes that make muscle stem cells in the embryo are surprisingly not needed in adult muscle stem cells to regenerate muscles after...
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Integrity of hereditary material—the genome —is critical for species survival. Genomes need protection from agents that can cause mutations affecting DNA coding, regulatory functions, and duplication during cell division. DNA sequences called transposons, or jumping genes (discovered by Carnegie’s...
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Baltimore, MD —You may think you have dinner all to yourself, but you’re actually sharing it with a vast community of microbes waiting within your digestive tract. A new study from a team including...
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Baltimore, MD—Mammalian females ovulate periodically over their reproductive lifetimes, placing significant demands on their ovaries for egg production. Whether mammals generate new eggs in adulthood...
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Explore Carnegie Science

June 28, 2018

Baltimore, MD—A tremendous amount of genetic material must be packed into the nucleus of every cell—a tiny compartment. One of the biggest challenges in biology is to understand how certain regions of this highly packaged DNA can be called upon, so that the genes encoded in them can be “turned on,” or expressed and used to manufacture RNA and proteins.

New work published in Molecular Cell by a team of biologists from Carnegie, Soonchunhyang University, and Johns Hopkins University has shed light on this process and their findings have implications for certain age-related diseases and organ decay.

The nucleus, where a cell’s DNA is housed, is surrounded by two membrane

May 7, 2018

Baltimore, MD—Allan C. Spradling, Director Emeritus of Carnegie’s Department of Embryology, has been awarded the 23rd March of Dimes and Richard B. Johnson, Jr., MD Prize in Developmental Biology as “an outstanding scientist who has profoundly advanced the science that underlies our understanding of prenatal development and pregnancy.”

Department director and Carnegie co-interim president Yixian Zheng remarked, “Allan is a legend in developmental biology. We are all delighted by this well- deserved recognition of Allan’s groundbreaking research.”

Spradling’s decades of scientific accomplishments cover a broad spectrum of advancements. Since the early 20th century, the fruit

Carnegie Science, Carnegie Institution, Carnegie Institution for Science, Neta Schwartz
November 27, 2017

Washington, DC—Not too long ago, biologists would induce mutations in an entire genome, isolate an organism that displayed a resulting disease or abnormality that they wanted to study, and then work backward to determine which gene was responsible for the defect.  This process often took years to yield definitive results.

Now, thanks to the CRISPR/Cas9 genome-editing tool, biologists can target specific genes for mutation and then see how this induced mutation manifests in an organism—tackling the problem from the other direction. But they are finding that the expected physical changes don’t always occur.

Why?

New work from Carnegie’s Steven Farber and Jennifer

Carnegie Science, Carnegie Institution, Carnegie Institution for Science,
July 13, 2017

Baltimore, MD— The brain is the body’s mission control center, sending messages to the other organs about how to respond to various external and internal stimuli. Located in the forebrain, the habenular region is one such message-conducting system. Two new papers from Carnegie scientists explain how the habenulae develop and their unsuspected role in recovering from fear.

Found in all vertebrates, the bilaterally paired habenulae regulate the transmission of dopamine and serotonin, two important chemicals related to motor control, mood, and learning.

Previous research has shown that the habenular system is involved in modulating sleep cycles, anxiety, and pain and reward

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The Spradling laboratory studies the biology of reproduction. By unknown means eggs reset the normally irreversible processes of differentiation and aging. The fruit fly Drosophila provides a favorable multicellular system for molecular genetic studies. The lab focuses on several aspects of egg development, called oogenesis, which promises to provide insight into the rejuvenation of the nucleus and surrounding cytoplasm. By studying ovarian stem cells, they are learning how cells maintain an undifferentiated state and how cell production is regulated by microenvironments known as niches. They are  also re-investigating the role of steroid and prostaglandin hormones in controlling the

Stem cells make headline news as potential treatments for a variety of diseases. But undertstanding the nuts and bolts of how they develop from an undifferentiated cell  that gives rise to cells that are specialized such as organs, or bones, and the nervous system, is not well understood. 

The Lepper lab studies the mechanics of these processes. overturned previous research that identified critical genes for making muscle stem cells. It turns out that the genes that make muscle stem cells in the embryo are surprisingly not needed in adult muscle stem cells to regenerate muscles after injury. The finding challenges the current course of research into muscular dystrophy, muscle

The Marnie Halpern laboratory studies how left-right differences arise in the developing brain and discovers the genes that control this asymmetry. Using the tiny zebrafish, Danio rerio, they explores how regional specializations occur within the neural tube, the embryonic tissue that develops into the brain and spinal cord.

The zebrafish is ideal for these studies because its basic body plan is set within 24 hours of fertilization. By day five, young larvae are able to feed and swim, and within three months they are ready to reproduce. They are also prolific breeders. Most importantly the embryos are transparent, allowing scientists to watch the nervous system develop and to

The Gall laboratory studies all aspects of the cell nucleus, particularly the structure of chromosomes, the transcription and processing of RNA, and the role of bodies inside the cell nucleus, especially the Cajal body (CB) and the histone locus body (HLB).

Much of the work makes use of the giant oocyte of amphibians and the equally giant nucleus or germinal vesicle (GV) found in it. He is particularly  interested in how the structure of the nucleus is related to the synthesis and processing of RNA—specifically, what changes occur in the chromosomes and other nuclear components when RNA is synthesized, processed, and transported to the cytoplasm.

Yixian Zheng, director of the Department of Embryology, serves as co-interim president of Carnegie as of January 1, 2018. Her lab has a long-standing interest in cell division. In recent years, their findings have broadened their research using animal models, to include the study of stem cells, genome organization, and lineage specification—how stem cells differentiate into their final cell forms. They use a wide range of tools, including genetics in different model organisms, cell culture, biochemistry, proteomics, and genomics.

Cell division is essential for all organisms to grow and live. During a specific time in a cell’s cycle the elongated apparatus consisting of string-like

Staff associate Christoph Lepper, with colleagues, overturned previous research that identified critical genes for making muscle stem cells. It turns out that the genes that make muscle stem cells in the embryo are surprisingly not needed in adult muscle stem cells to regenerate muscles after injury. The finding challenges the current course of research into muscular dystrophy, muscle injury, and regenerative medicine, which uses stem cells for healing tissues, and it favors using age-matched stem cells for therapy.

Previous studies showed that two genes Pax3 and Pax7, are essential for making the embryonic and neonatal muscle stem cells in the mouse. But Lepper and team for the

The first step in gene expression is the formation of an RNA copy of its DNA. This step, called transcription, takes place in the cell nucleus. Transcription requires an enzyme called RNA polymerase to catalyze the synthesis of the RNA from the DNA template. This, in addition to other processing factors, is needed before messenger RNA (mRNA) can be exported to the cytoplasm, the area surrounding the nucleus.

Although the biochemical details of transcription and RNA processing are known, relatively little is understood about their cellular organization. Joseph G. Gall has been an intellectual leader and has made seminal breakthroughs in our understanding of chromosomes, nuclei and

Steven Farber

In mammals, most lipids, such as fatty acids and cholesterol, are absorbed into the body via the small intestine. The complexity of the cells and fluids that inhabit this organ make it very difficult to study in a laboratory setting. The goal of the Farber lab is to better understand the cell and molecular biology of lipids within digestive organs by exploiting the many unique attributes of the clear zebrafish larva  to visualize lipid uptake and processing in real time.  Given their utmost necessity for proper cellular function, it is not surprising that defects in lipid metabolism underlie a number of human diseases, including obesity, diabetes, and atherosclerosis.

The Farber